Dell EMC Ready Solutions for HPC storage

When organizations, including the University of Cambridge, Cardiff University and the University of Pisa, wanted to advance their data-centric research for new and emerging communities, they turned to Dell Technologies, Inc. for HPC solutions.

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“Every day, researchers worldwide push the limits of what we perceive as possible, by collaborating to create and enhance life-saving technologies,” said Thierry Pellegrino, VP, data-centric workloads and solutions. “Our goal is to deliver HPC solutions that give more organizations the modern infrastructure they need to use advanced data analytics and AI to develop the next discovery, the next breakthrough and the next never-before.“

Investing in HPC’s exascale future
The world’s data growth, predicted to reach 175ZBs by 2025, up from 44ZBs today ⁽¹⁾, challenges even the largest HPC systems. To adapt to larger data sets and compute-intensive analytics processes, researchers are looking to exascale systems, capable of performing one quintillion (10¹⁸) calculations per second, which is 5x faster than the world’s current most powerful HPC. Researchers expect this advanced performance to have profound impacts so they can discover more effective medications sooner, identify and react to pandemics faster, and warn of hazardous weather conditions before they happen.

The company has collaborated with Intel Corp. and the University of Cambridge, which houses one of the UK’s top performing HPCs, to launch the Open Exascale Lab. Dedicated to facilitating innovation and investigating emerging exascale technologies, the lab enables the most advanced technology leaders and experts to collaborate on HPC’s next-gen systems. Dell EMC servers, networking and storage equipped with the latest Intel technologies power this environment.

Dell, the University of Cambridge and Intel have also collaborated on one of a fast open source HPC storage solutions that can speed time to discovery or insight by alleviating performance bottlenecks between compute and storage. The pre-tested and validated Dell EMC Ready Solutions for HPC – Data Accelerator (DAC) feeds data via NVMe drives to achieve the speeds required for high-performance applications and make the results available more quickly.

“For people who do analytics or ML and process lots of data, we are bringing together one system with high levels of compute and I/O,” said Dr. Paul Calleja, director, research computing, Cambridge University. “This allows both customization and security for the tenants. With all these things together, the Data Accelerator can be used to deliver data-centric research to new and emerging communities.“

The initial implementation of DAC on the university’s Cumulus HPC debuted as a world’s fastest HPC storage system on the June 2019 I/O-500 list. Nearly double the performance of the second-place entry, it provides approximately 500TB of usable capacity on 24 DAC nodes.

Fueling medical discoveries
The company is also collaborating with the UK National Health Services (NHS) and Cardiff University to advance HPC systems that help transform public health and personalized medicine. Specifically, the bioscience teams at both organizations use next-gen genome sequencing on Dell’ HPC solutions to help fight infectious diseases and improve public health. For example, already having sequenced over 30,000 SARS-CoV-2 genomes, they are working with the Covid-19 Genomics UK Consortium to map the spread of Covid-19. By tracking the global spread at a genomic level, researchers gain insights into the transmission dynamics and measure the effects of preventative interventions and policies adopted by various countries.

“Genomic sequencing will help us to understand coronavirus and its spread,” said Dr. Thomas Connor, bioinformatics lead, Public Health Wales Pathogen Genomics Unit, and lead, sequencing center, Cardiff University. “By analyzing samples from people who had confirmed cases of Covid-19, scientists can monitor changes in the virus at a national scale to understand how the virus is spreading and whether different strains are emerging. Having this information available will help in the clinical care of patients – and ultimately help to save lives.“

Powerstore appliance

Expanding HPC’s reach
As a the company’s HPC and AI Center of Excellence (CoE) with expertise in VMware, the University of Pisa strives to make HPC and AI more accessible throughout the research community and beyond. It is one of the first organizations to use the purpose-built Dell EMC PowerStore, which blends automation, next-gen technology and a novel software architecture to help organizations address the rapidly growing need for data.

7x faster and 3x more responsive than previous firm’s mid-range storage arrays, PowerStore simplifies IT infrastructure by supporting a range of both traditional and emerging workloads with its scale-up, scale-out architecture. By virtualizing IT resources with VMware, the university can use resources more cost-effectively and make it easier for IT administrators and end users to deploy, manage and change the infrastructure.

“PowerStore combines the advantages of cutting-edge storage hardware and software,” says Maurizio Davini, CTO, University of Pisa. “It’s that flexibility to define the resources for our users, for our applications, that makes the difference so we can quickly flex to meet changing needs.“

Dell EMC Ready Solutions for HPC storage, Data Accelerator will be available on June 30, 2020.

Resources:
Dell Technologies HPC and AI Centers of Excellence
Dell EMC Ready Solutions for HPC Storage, Data Accelerator

⁽¹⁾ IDC White Paper, sponsored by Seagate, Data Age 2025: The Digitization of the World From Edge to Core, November 2018.